Research Papers

Structure Analysis of Highyielding Rice Varieties and Their Derived Lines Bred by Shenyang Agricultural University

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  • Rice Research Institute/Key Laboratory of Rice Biology and Breeding, Ministry of Agriculture/ Key Laboratory of Northern japonica Super Rice Breeding, Ministry of Education, Shenyang Agricultural University, Shenyang 110866, China;

Received date: 2014-01-19

  Revised date: 2014-03-18

  Online published: 2014-09-10

Abstract

Six highyield varieties (Shennong 265, Shennong 606, Shennong 9741, Qianchonglang 1, Shennong 9903, Shennong 9816) and 570 inbred lines were used as materials to analyze the utilization of seven cloned yieldrelated functional gene (DEP1, GS5, qSW5, Gn1a, qGW8, GS3 and  GW2) and the contribution of indica blood in the japonica rice breeding of Liaoning Province. The results showed that allelic variations were detected from all of the functional gene loci except for GW2. The loci of DEP1, qSW5 and qGW8 were widely used in japonica rice breeding by the breeders at Shenyang Agricultural University. In the 570 inbred lines, 467 lines (82.13% of the lines) contained DEP1, 550 lines (96.5% of the lines) contained qSW5, and 351 lines (61.6% of the lines) contained qGW8. The functional alleles of GS5, Gn1a and GS3 were also present in a small number of lines, and the rates were 5.44%, 070% and 1.05%, respectively. The results of the analysis with 32 indicajaponica specific markers showed that indicajaponica differentiation on these sites existed in 54.0% of the lines. Most of the indica genetic loci were located on chromosome 5, with a percentage of 20.8%.

Cite this article

YANG Xianli, WANG Jiayu*, LIU Dan, ZHANG Ling, LI Xiaonan, LV Guoyi . Structure Analysis of Highyielding Rice Varieties and Their Derived Lines Bred by Shenyang Agricultural University[J]. Chinese Journal OF Rice Science, 2014 , 28(5) : 496 -502 . DOI: 10.3969/j.issn.1001-7216.2014.05.007

References

\[1\]刘迪, 李红宇, 孙健, 等. 应用SSR分子标记评价不同年代东北三省粳稻基因组遗传构成. 黑龙江农业科学, 2011(7): 16.

\[2\]张立娜, 曹桂兰, 韩龙植. 利用SSR标记揭示中国粳稻地方品种遗传多样性. 中国农业科学, 2012, 45(3): 405413.

\[3\]杨守仁, 张龙步, 陈温福, 等. 水稻超高产育种的理论和方法. 中国水稻科学, 1996, 10(2): 115120.

\[4\]Huang X Z, Qian Q,  Liu H Y,  et al.  Natural variation at the DEP1 locus enhances grain yield in rice.  Nat Genet,  2009, 41(4): 494497.

\[5\]Li Y B, Fan C C, Xing Y Z, et al.  Natural variation in GS5 plays an important role in regulating grain size and yield in rice.  Nat Genet,  2011, 43(12): 12661269.

\[6\] Shomura A,  Izawa T,  Ebana K, et al. Deletion in a gene associated with grain size increased yields during rice domestication. Nat Genet,  2008, 40(8): 10231028.

\[7\]Ashikari M, Sakakibara H,  Lin S, et al. Cytokinin oxidase regulates rice grain production. Science,  2005, 309(5735): 741745.

\[8\]Wang S K, Wu K,  Yuan Q B, et al. Control of grain size, shape and quality by OsSPL16 in rice.  Nat Genet, 2012, 44(8): 950954.

\[9\]TakanoKai N, Doi K,  Yoshimura A.  GS3 participates in stigma exsertion as well as seed length in rice.  Breeding Sci, 2011,  61(3): 244250.

\[10\] Song X J, Huang W, Shi M, et al. A QTL for rice grain width and weight encodes a previously unknown RINGtype E3 Ubiquitin ligase.  Nat Genet,  2007, 39(5): 623630.

\[11\]刘丹, 王嘉宇, 孙健, 等. 利用InDel和SSILP标记分析北方粳型超级稻的遗传组成. 中国水稻科学, 2014, 28(2): 148154.

\[12\]Doyle J J, Doyle J L.  A rapid DNA isolation procedure for small quantities of fresh leaf tissue.   Phytochem Bull,  1987, 19: 1115. 

\[13\]Yan C J, Yan S, Yang Y C, et al. Development of genetagged markers for quantitative trait loci underlying rice yield components.  Euphytica,  2009, 169(2): 215226.

\[14\]Sun J, Liu D, Wang J Y, et al.  The contribution of intersubspecic hybridization to the breeding of superhighyielding japonica rice in northeast China.  Theor Appl Genet,  2012, 125(6): 11491157.

\[15\] Lu B R, Cai  X X, Jin X. Efficient indica and japonica rice identification based on the InDel molecular method: Its implication in rice breeding and evolutionary research.  Progr Nat Sci,  2009, 19(10): 12411252.

\[16\]杨守仁. 水稻超高产育种新动向—理想株型与优势利用相结合. 沈阳农业大学学报, 1987, 18(1): 15.

\[17\]Nei M.  Genetic distance between populations.  Am Nat,  1972, 106: 283292.

\[18\] Yamasaki M, Ideta O.  Population structure in Japanese rice population.  Breeding Sci, 2013, 63: 4957. 

\[19\]Choudhury B, Khan M L, Dayanandan S. Genetic structure and diversity of indigenous rice(Oryza sativa) varieties in the Eastern Himalayan region of Northeast India.  SpringerPlus, 2013, 2(1): 110.

\[20\]刘化龙, 郑洪亮, 赵宏伟, 等. 东北粳稻群体结构和连锁不平衡分析. 分子植物育种, 2013, 11(5): 494501.

\[21\]贾宝艳, 王伯伦, 关荣霞, 等. 辽宁不同株型水稻品种的RAPD分析. 作物学报, 2005, 31(7): 952955.

\[22\]姜树坤, 王政海, 钟鸣, 等. 辽宁省近15年的部分水稻主栽品种的简单重复序列(SSR)多态性分析. 植物生理学通讯, 2007, 43(1): 6972.

\[23\]高虹, 李飞飞, 吕国依, 等. 籼粳稻杂交对中国东北粳稻品质的影响. 作物学报, 2013, 39(10): 18061813.
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