Research Papers

Molecular  Classification  of   indicajaponica  Rice According to     Widecompatibility Gene S5  Sequence with Endonuclease CEL Ⅰ 

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  • 1 State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China;  2 Institute of Biotechnology, Hangzhou Academy of Agricultural Sciences, Hangzhou 310024, China;

Received date: 2011-10-20

  Revised date: 2011-11-16

  Online published: 2012-09-10

Abstract

Cloning of the major locus S5,  a widecompatibility gene has laid a molecular basis for identification of the widecompatibility varieties(WCV). According to the difference in S5 locus sequence among indica, japonica and WCV,  PCR was conducted and celery endonuclease CEL Ⅰ,which cleaves DNA with high specificity at sites of basesubstitution mismatch, was used to digest PCR products so as to distinguish various S5 DNA fragments. The results showed that the method is accurate in indicajaponica classification. At the same time, a new genotype on the S5 locus was found.

Cite this article

NI Shen1 , XIAO Wenfei2, CHEN Hongqi1, WANG Yuexing1, ZHU Xudong1,* . Molecular  Classification  of   indicajaponica  Rice According to     Widecompatibility Gene S5  Sequence with Endonuclease CEL Ⅰ [J]. Chinese Journal OF Rice Science, 2012 , 26(5) : 549 -554 . DOI: 10.3969/j.issn.10017216.2012.05.006

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