
水稻粉质胚乳突变体we1的表型分析与基因定位
收稿日期: 2024-05-15
修回日期: 2024-08-20
网络出版日期: 2025-07-21
基金资助
国家自然科学基金资助项目(32201861);江苏省重点研发计划资助项目(BE2023362);江苏省种业振兴揭榜挂帅项目(JBGS(2021)008)
Phenotypic Analysis and Gene Mapping of a Floury Endosperm Mutant we1 in Rice
Received date: 2024-05-15
Revised date: 2024-08-20
Online published: 2025-07-21
【目的】对粉质胚乳突变体的研究有助于解析稻米品质形成的分子机制。【方法】从日本晴60Co诱变突变体库中筛选到一份粉质皱缩胚乳突变体we1(white endosperm1),对其表型、理化性质进行分析,并利用we1与9311杂交获得的F2群体对目标基因进行精细定位。【结果】we1胚乳表现为白色粉质皱缩状,淀粉颗粒排列疏松且不规则;千粒重、株高、总淀粉、直链淀粉含量显著下降,脂肪含量显著上升。遗传分析表明we1粉质皱缩胚乳性状受单个隐性基因控制。利用we1/9311 F2群体进行基因定位,WE1被定位在6号染色体短臂P16和P18之间约181 kb区间内,该区间包含23个开放阅读框(Open reading frame, ORFs)。qRT-PCR 结果显示,WE1的突变会影响淀粉合成相关基因的表达。【结论】WE1可能是一个参与淀粉合成的新基因,本研究为进一步解析WE1调控水稻淀粉合成的分子机制奠定了基础。
朱建平, 李霞, 李文奇, 许扬, 王芳权, 陶亚军, 蒋彦婕, 陈智慧, 范方军, 杨杰 . 水稻粉质胚乳突变体we1的表型分析与基因定位[J]. 中国水稻科学, 2025 , 39(4) : 543 -551 . DOI: 10.16819/j.1001-7216.2025.240508
【Objective】 The study of floury endosperm mutants is helpful for elucidating the molecular mechanisms underlying rice grain quality formation. 【Method】 A stably inherited floury endosperm mutant we1 (white endosperm 1) was isolated from a 60Co-irradiated mutant pool of japonica rice cultivar Nipponbare. Phenotypic characterization and physicochemical analyses of we1 were conducted. An F2 population derived from a cross between we1 and indica variety 9311 was used for fine mapping. 【Result】 Compared with the wild type, we1 exhibited white, shrunken endosperm with irregularly shaped and loosely packed compound starch granules. The mutant showed significant reductions in 1000-grain weight, plant height, total starch content, and amylose content, along with a marked increase in lipid content. Genetic analysis indicated that the mutant phenotype was controlled by a single recessive nuclear gene. For map-based cloning, we1 was crossed with 9311 and recessive F2 individuals were selected. The WE1 locus was initially mapped to chromosome 6 and fine-mapped to a 181-kb physical interval. Twenty-three open reading frames (ORFs) were predicted in this region. qRT-PCR analysis revealed altered expression levels of starch synthesis-related genes in the we1 mutant. 【Conclusion】 WE1 likely encodes a novel gene involved in starch synthesis, providing a foundation for further elucidating its molecular regulatory mechanisms in rice.
Key words: rice; floury endosperm; starch; physicochemical property; fine mapping
| [1] | Smith A M, Zeeman S C. Starch: A flexible, adaptable carbon store coupled to plant growth[J]. Annual Review of Plant Biology, 2020, 71: 217-245. |
| [2] | 朱霁晖, 张昌泉, 顾铭洪, 刘巧泉. 水稻Wx基因的等位变异及育种利用研究进展[J]. 中国水稻科学, 2015, 29(4): 431-438. |
| Zhu J H, Zhang C Q, Gu M H, Liu Q Q. Progress in the allelic variation of Wx gene and its application in rice breeding[J]. Chinese Journal of Rice Science, 2015, 29(4): 431-438. (in Chinese with English abstract) | |
| [3] | Nakamura Y. Towards a better understanding of the metabolic system for amylopectin biosynthesis in plants: Rice endosperm as a model tissue[J]. Plant and Cell Physiology, 2002, 43(7): 718-725. |
| [4] | Hirose T, Terao T. A comprehensive expression analysis of the starch synthase gene family in rice (Oryza sativa L.)[J]. Planta, 2004, 220(1): 9-16. |
| [5] | Ohdan T, Francisco P B Jr, Sawada T, Hirose T, Terao T, Satoh H, Nakamura Y. Expression profiling of genes involved in starch synthesis in sink and source organs of rice[J]. Journal of Experimental Botany, 2005, 56(422): 3229-3244. |
| [6] | Utsumi Y, Utsumi C, Sawada T, Fujita N, Nakamura Y. Functional diversity of isoamylase oligomers: The ISA1 Homo-oligomer is essential for amylopectin biosynthesis in rice endosperm[J]. Plant Physiology, 2011, 156(1): 61-77. |
| [7] | Li P, Chen Y H, Lu J, Zhang C Q, Liu Q Q, Li Q F. Genes and their molecular functions determining seed structure, components, and quality of rice[J]. Rice, 2022, 15(1): 18. |
| [8] | 张习春, 鲁菲菲, 吕育松, 罗荣剑, 焦桂爱, 邬亚文, 唐绍清, 胡培松, 魏祥进. 两个垩白突变体的鉴定及突变基因的图位克隆[J]. 中国水稻科学, 2017, 31(6): 568-579. |
| Zhang D C, Lu F F, Lü Y S, Luo R J, Jiao G A, Wu Y W, Tang S Q, Hu P S, Wei X J. Identification and gene mapping-based clone of two chalkiness mutants in rice[J]. Chinese Journal of Rice Science, 2017, 31(6): 568-579. (in Chinese with English abstract) | |
| [9] | 杜溢墨, 潘天, 田云录, 刘世家, 刘喜, 江玲, 张文伟, 王益华, 万建民. 水稻粉质皱缩胚乳突变体fse4的表型分析与基因克隆[J]. 中国水稻科学2019, 33(6): 499-512. |
| Du Y M, Pan T, Tian Y L, Liu S J, Liu X, Jiang L, Zhang W W, Wang Y H, Wan J M. Phenotypic analysis and gene cloning of rice floury endosperm mutant fse4[J]. Chinese Journal of Rice Science, 2019, 33(6): 499-512. (in Chinese with English abstract | |
| [10] | 唐小涵, 刘世家, 刘喜, 田云录, 王云龙, 滕烜, 段二超, 张元燕, 江玲, 张文伟, 王益华, 万建民. 色氨酰-tRNA合成酶基因WRS1调控水稻种子发育[J]. 中国水稻科学, 2020, 34(5): 383-396. |
| Tang X H, Liu S J, Liu X, Tian Y L, Wang Y L, Teng X, Duan E C, Zhang Y Y, Jiang L, Zhang W W, Wang Y H, Wan J M. Tryptophanyl-tRNA synthetase gene WRS1 regulates rice seed development[J]. Chinese Journal of Rice Science, 2020, 34(5): 383-396. (in Chinese with English abstract) | |
| [11] | She K C, Kusano H, Koizumi K, Yamakawa H, Hakata M, Imamura T, Fukuda M, Naito N, Tsurumaki Y, Yaeshima M, Tsuge T, Matsumoto K, Kudoh M, Itoh E, Kikuchi S, Kishimoto N, Yazaki J, Ando T, Yano M, Aoyama T, Sasaki T, Satoh H, Shimada H. A novel factor FLOURY ENDOSPERM2 is involved in regulation of rice grain size and starch quality[J]. The Plant Cell, 2010, 22(10): 3280-3294. |
| [12] | Kang H G, Park S, Matsuoka M, An G H. White-core endosperm in rice is generated by knockout mutations in the C-type pyruvate orthophosphate dikinase gene (OsPPDKB)[J]. Plant Journal, 2005, 42(6): 901-911. |
| [13] | Ryoo N, Yu C, Park C S, Baik M Y, Park I M, Cho M H, Bhoo S H, An G, Hahn T R, Jeon J S. Knockout of a starch synthase gene OsSSIIIa/Flo5 causes white-core floury endosperm in rice[J]. Plant Cell Reports, 2007, 26(7): 1083-1095. |
| [14] | Peng C, Wang Y H, Liu F, Ren Y L, Zhou K N, Lü J, Zheng M, Zhao S L, Zhang L, Wang C M, Jiang L, Zhang X, Guo X P, Bao Y Q, Wan J M. FLOURY ENDOSPERM6 encodes a CBM48 domain-containing protein involved in compound granule formation and starch synthesis in rice endosperm[J]. Plant Journal, 2014, 77(6): 917-930. |
| [15] | Zhang L, Ren Y L, Lu B Y, Yang C Y, Feng Z M, Liu Z, Chen J, Ma W W, Wang Y, Yu X W, Wang Y L, Zhang W W, Wang Y H, Liu S J, Wu F Q, Zhang X, Guo X P, Bao Y Q, Jiang L, Wan J M. FLOURY ENDOSPERM7 encodes a regulator of starch synthesis and amyloplast development essential for peripheral endosperm development in rice[J]. Journal of Experimental Botany, 2016, 67(3): 633-647. |
| [16] | Yan H G, Zhang W W, Wang Y H, Jin J, Xu H C, Fu Y S, Shan Z Z, Wang X, Teng X, Li X, Wang Y X, Hu X Q, Zhang W X, Zhu C Y, Zhang X, Zhang Y, Wang R Q, Zhang J, Cai Y, You X M, Chen J, Ge X Y, Wang L, Xu J H, Jiang L, Liu S J, Lei C L, Zhang X, Wang H Y, Ren Y L, Wan J M. Rice LIKE EARLY STARVATION1 cooperates with FLOURY ENDOSPERM 6 to modulate starch biosynthesis and endosperm development[J]. The Plant Cell, 2024, 36(5): 1892-1912. |
| [17] | You X M, Zhang W W, Hu J L, Jing R N, Cai Y, Feng Z M, Kong F, Zhang J, Yan H G, Chen W W, Chen X G, Ma J, Tang X J, Wang P, Zhu S S, Liu L L, Jiang L, Wan J M. FLOURY ENDOSPERM15 encodes a glyoxalase I involved in compound granule formation and starch synthesis in rice endosperm[J]. Plant Cell Reports, 2019, 38(3): 345-359. |
| [18] | Teng X, Zhong M S, Zhu X P, Wang C M, Ren Y L, Wang Y L, Zhang H, Jiang L, Wang D, Hao Y Y, Wu M M, Zhu J P, Zhang X, Guo X P, Wang Y H, Wan J M. FLOURY ENDOSPERM16 encoding a NAD-dependent cytosolic malate dehydrogenase plays an important role in starch synthesis and seed development in rice[J]. Plant Biotechnology Journal, 2019, 17(10): 1914-1927. |
| [19] | Lei J, Teng X, Wang Y F, Jiang X K, Zhao H H, Zheng X M, Ren Y L, Dong H, Wang Y L, Duan E C, Zhang Y Y, Zhang W W, Yang H, Chen X L, Chen R B, Zhang Y, Yu M Z, Xu S B, Bao X H, Zhang P C, Liu S J, Liu X, Tian Y L, Jiang L, Wang Y H, Wan J M. Plastidic pyruvate dehydrogenase complex E1 component subunit Alpha1 is involved in galactolipid biosynthesis required for amyloplast development in rice[J]. Plant Biotechnology Journal, 2022, 20(3): 437-453. |
| [20] | Wei X J, Jiao G A, Lin H Y, Sheng Z H, Shao G N, Xie L H, Tang S Q, Xu Q G, Hu P S. GRAIN INCOMPLETE FILLING 2 regulates grain filling and starch synthesis during rice caryopsis development[J]. Journal of Integrative Plant Biology, 2017, 59(2): 134-153. |
| [21] | 方鹏飞, 李三峰, 焦桂爱, 谢黎虹, 胡培松, 魏祥进, 唐绍清. 水稻粉质胚乳突变体flo7的理化性质及基因定位[J]. 中国水稻科学, 2014, 28(5): 447-457. |
| Fang P F, Li S F, Jiao G A, Xie L H, Hu P S, Wei X J, Tang S Q. Physicochemical property analysis and gene mapping of a floury endosperm mutant flo7 in rice[J]. Chinese Journal of Rice Science, 2014, 28(5): 447-457. (in Chinese with English abstract) | |
| [22] | 李景芳, 田云录, 刘喜, 刘世家, 陈亮明, 江玲, 张文伟, 徐大勇, 王益华, 万建民. 鸟苷酸激酶 OsGK1 对水稻种子发育至关重要[J]. 中国水稻科学, 2018, 32(5): 415-426. |
| Li J F, Tian Y L, Liu X, Liu S J, Chen L M, Jiang L, Zhang W W, Xu D Y, Wang Y H, Wan J M. The guanylate kinase OsGK1 is essential for seed development in rice[J]. Chinese Journal of Rice Science, 2018, 32(5): 415-426. (in Chinese with English abstract) | |
| [23] | 于艳芳, 刘喜, 田云录, 刘世家, 陈亮明, 朱建平, 王云龙, 江玲, 张文伟, 王益华, 万建民. 水稻粉质胚乳fse3突变体的表型分析及基因定位[J]. 中国农业科学, 2018, 51(11): 2023-2037. |
| Yu Y F, Liu X, Tian Y L, Liu S J, Chen L M, Zhu J P, Wang Y L, Jiang L, Zhang W W, Wang Y H, Wan J M. Phenotypic analysis and gene mapping of a floury and shrunken endosperm mutant fse3 in rice[J]. Scientia Agricultura Sinica, 2018, 51(11): 2023-2037. (in Chinese with English abstract) | |
| [24] | 潘鹏屹, 朱建平, 王云龙, 郝媛媛, 蔡跃, 张文伟, 江玲, 王益华, 万建民. 水稻粉质胚乳突变体ws 的表型分析及基因克隆[J]. 中国水稻科学, 2016, 30(5): 447-457. |
| Pan P Y, Zhu J P, Wang Y L, Hao Y Y, Cai Y, Zhang W W, Jiang L, Wang Y H, Wan J M. Phenotyping and gene cloning of a floury endosperm mutant ws in rice[J]. Chinese Journal of Rice Science, 2016, 30(5): 447-457. (in Chinese with English abstract) | |
| [25] | Hu T T, Tian Y L, Zhu J P, Wang Y L, Jing R N, Lei J, Sun Y L, Yu Y F, Li J F, Chen X L, Zhu X P, Hao Y Y, Liu L L, Wang Y H, Wan J M. OsNDUFA9 encoding a mitochondrial complex I subunit is essential for embryo development and starch synthesis in rice[J]. Plant Cell Reports, 2018, 37(12): 1667-1679. |
| [26] | Wang J C, Xu H, Zhu Y, Liu Q Q, Cai X L. OsbZIP58, a basic leucine zipper transcription factor, regulates starch biosynthesis in rice endosperm[J]. Journal of Experimental Botany, 2013, 64(11): 3453-3466. |
| [27] | Fu F F, Xue H W. Coexpression analysis identifies rice starch regulator1, a rice AP2/EREBP family transcription factor, as a novel rice starch biosynthesis regulator[J]. Plant Physiology, 2010, 154(2): 927-938. |
| [28] | Xiong Y F, Ren Y, Li W, Wu F S, Yang W J, Huang X L, Yao J L. NF-YC12 is a key multi-functional regulator of accumulation of seed storage substances in rice[J]. Journal of Experimental Botany, 2019, 70(15): 3765-3780. |
| [29] | Bello B K, Hou Y X, Zhao J, Jiao G A, Wu Y W, Li Z Y, Wang Y F, Tong X H, Wang W, Yuan W Y, Wei X J, Zhang J. NF-YB1-YC12-bHLH144 complex directly activates Wx to regulate grain quality in rice (Oryza sativa L.)[J]. Plant Biotechnology Journal, 2019, 17(7): 1222-1235. |
| [30] | Wang J, Chen Z C, Zhang Q, Meng S S, Wei C X. The NAC Transcription factors OsNAC20 and OsNAC26 regulate starch and storage protein synthesis[J]. Plant Physiology, 2020, 184(4): 1775-1791. |
| [31] | Wu M W, Liu J X, Bai X, Chen W Q, Ren Y L, Liu J L, Chen M M, Zhao H, Yao X F, Zhang J D, Wan J M, Liu C M. Transcription factors NAC20 and NAC26 interact with RPBF to activate albumin accumulations in rice endosperm[J]. Plant Biotechnology Journal, 2023, 21(5): 890-892. |
/
| 〈 |
|
〉 |