研究报告

籼粳亚种间育性位点分型及籼粳杂交稻育性位点模式研究

展开
  • 1江西省农业科学院 水稻研究所, 南昌 330200
    2水稻国家工程研究中心(南昌)/国家水稻改良中心 南昌分中心, 南昌 330200
    3南昌市农业科学院, 南昌 330038

收稿日期: 2023-08-04

  修回日期: 2023-10-19

  网络出版日期: 2024-07-11

基金资助

江西现代农业科研协同创新专项(JXXTCXQN202104);江西省种业联合攻关计划资助项目(JXZYLGGG3121607)

Typing of Inter-subspecific Fertility Loci and Fertility Locus Pattern of indica-japonica Hybrid Rice

Expand
  • 1Rice Research Institute, Jiangxi Academy of Agricultural Sciences, Nanchang 330200, China
    2Rice National Engineering Research Center (Nanchang) / Nanchang Sub-center, National Rice Improvement Center, Nanchang 330200, China
    3Nanchang Academy of Agricultural Sciences, Nanchang 330038, China

Received date: 2023-08-04

  Revised date: 2023-10-19

  Online published: 2024-07-11

摘要

【目的】 了解我国籼稻、粳稻材料及籼粳杂交稻组合中亚种间育性位点的分布,建立实现亚种间育性亲和所需遗传位点模式,探索新的籼粳杂交稻组合模式,为亚种间亲和材料改良和籼粳育性亲和分子设计育种打下基础。【方法】 通过筛选得到育性位点的籼粳分型标记对我国水稻材料进行育性位点的籼粳分型检测,挑选部分籼稻、粳稻亲本进行杂交并统计分析F1代花粉育性和结实率。【结果】 籼稻和粳稻之间在所有育性位点均存在少量相互渗入。由于籼稻育性位点渗入,粳稻可以分为Ⅰ型(所有位点均为粳型)和Ⅱ型(SciSdiSei,上标i代表来自籼稻)。S5不亲和时籼粳杂交稻结实率约为50%,亲和时结实率约为80%。SaSbScSd单个位点杂合对于花粉育性影响较小,但Se/pf12/RHS12单个位点杂合时显著降低花粉育性。籼粳杂交稻材料检测结果表明其育性位点的基本模式是S5和部分花粉育性位点纯合/亲和。带有S5n的籼稻两系不育系深08S与粳稻Ⅱ型材料的杂交F1代的花粉育性和结实率正常。【结论】 S5是控制雌配子育性的核心位点。影响雄配子育性的位点具有累加效应,其中Se可能是不可缺少的重要位点。S5+SeSaSbScSd任意两个纯合位点可能是实现籼粳亚种间育性亲和的基本遗传位点模式。以广亲和两系籼稻不育系为母本,常规粳稻为父本的“籼不粳恢”籼粳杂交模式是一个可行的亚种间组合模式。

本文引用格式

陈明亮, 曾细华, 沈雨民, 罗世友, 胡兰香, 熊文涛, 熊焕金, 吴小燕, 肖叶青 . 籼粳亚种间育性位点分型及籼粳杂交稻育性位点模式研究[J]. 中国水稻科学, 2024 , 38(4) : 386 -396 . DOI: 10.16819/j.1001-7216.2024.230801

Abstract

【Objective】 The objective of this study is to investigate the distribution of inter-subspecific fertility loci in indica rice, japonica rice, and indica-japonica hybrid rice in China. This involves establishing a pattern of fertility loci to achieve compatibility between different subspecies, exploring new indica-japonica hybrid rice patterns, and laying a molecular basis for improving materials and breeding designs for inter-subspecific compatibility.【Method】 Specific markers for indica and japonica rice were used to screen for inter-subspecific fertility loci in rice materials from China. Several indica and japonica rice varieties were crossed with each other, and the pollen fertility and seed setting rate of the resulting hybrids were statistically analyzed.【Results】 There was limited genetic exchange between indica and japonica rice at the fertility loci. Due to introgression of fertility loci from indica rice, japonica rice could be classified into type I (pure japonica) and type II (with introgressed indica loci such as Sci, Sdi, and Sei). When S5 was incompatible, the seed setting rate of inter-subspecific hybrid rice was approximately 50%, while it increased to about 80% when compatible. Heterozygosity at Sa, Sb, Sc, or Sd loci had minimal impact on pollen fertility, but heterozygosity of Se/pf12/RHS12 significantly reduced it. The detection results of inter-subspecific hybrid rice materials indicated that the basic fertility loci pattern was homozygous or compatible S5 along with several other fertility loci for pollen fertility. The pollen fertility and seed setting rate of F1 hybrids from the indica two-line male sterile line Shen 08S with S5n and japonica type II rice were normal.【Conclusion】 SS5 is the core locus controlling female gamete fertility, while loci affecting male gamete fertility have an additive effect. Se may be an indispensable locus among them. The possible basic genetic locus patterns for achieving fertility compatibility between indica and japonica subspecies include S5+Se+two other loci among Sa, Sb, Sc, and Sd. The ‘maternal indica paternal japonica’ model, utilizing two-line indica rice male sterile lines with wide compatibility as female parents and japonica rice as male parents, presents another feasible inter-subspecific hybrid rice model.

参考文献

[1] 袁隆平. 杂交稻的育种战略设想[J]. 杂交水稻, 1987(2): 1-3.
  Yuan L P. A tentative plan for the breeding of hybrid rice[J]. Hybrid Rice, 1987(2): 1-3.
[2] 宋昕蔚, 林建荣, 吴明国. 水稻籼粳亚种间杂种优势利用研究进展与展望[J]. 科学通报, 2016, 61(35): 3778-3786.
  Song X W, Lin J R, Wu M G. Review and prospect on utilization of heterosis between indica-japonica rice subspecies[J]. Chinese Science Bulletin, 2016, 61(35): 3778-3786. (in Chinese with English abstract)
[3] 孟天瑶, 李晓芸, 李超, 韦还和, 史天宇, 马荣荣, 王晓燕, 杨筠文, 戴其根, 张洪程. 甬优系列籼粳杂交稻中熟高产品系的株型特征[J]. 中国水稻科学, 2016, 30(2): 170-180.
  Meng T, Li X, Li C, Wei H, Shi T, Ma R, Wang X, Yang J, Dai Q, Zhang H. Plant-type characteristics of high-yielding lines of Yongyou japonica/indica hybrid rice with medium maturity[J]. Chinese Journal of Rice Sciences, 2016, 30(2): 170-180. (in Chinese with English abstract)
[4] Ouyang Y, Zhang Q. The molecular and evolutionary basis of reproductive isolation in plants[J]. Journal of Genetic and Genomics, 2018, 45(11): 613-620.
[5] 欧阳亦聃. 水稻籼粳杂种不育与广亲和[J]. 科学通报, 61(35): 3833-3841.
  Ouyang Y D. Progress of indica-japonica hybrid sterility and wide-compatibility in rice[J]. Chinese Science Bulltin, 2016, 61(35): 3833-3841. (in Chinese with English abstract)
[6] Zhang G. Prospects of utilization of inter-subspecific heterosis between indica and japonica rice[J]. Journal of Integrative Agriculture, 2020, 19(1): 1-10.
[7] Zhou P, Wang Z, Zhu X, Tang Y, Ye L, Yu H, Li Y, Zhang N, Liu T, Wang T, Wu Y, Cao D, Chen Y, Li X, Zhang Q, Xiao J, Yu S, Zhang Q, Mi J, Ouyang Y. A minimal genome design to maximally guarantee fertile inter-subspecific hybrid rice[J]. Molecular Plant, 2023, 16: 726-738.
[8] Wang C, Wang J, Lu J, Xiong Y, Zhao Z, Yu X, Zheng X, Li J, Lin Q, Ren Y, Hu Y, He X, Li C, Zeng Y, Miao R, Guo M, Zhang B, Zhu Y, Zhang Y, Tang W, Wang Y, Hao B, Wang Q, Cheng S, He X, Yao B, Gao J, Zhu X, Yu H, Wang Y, Sun Y, Zhou C, Dong H, Ma X, Guo X, Liu X, Tian Y, Liu S, Wang C, Cheng Z, Jiang L, Zhou J, Guo H, Jiang L, Tao D, Chai J, Zhang W, Wang H, Wu C, Wan J. A natural gene drive system confers reproductive isolation in rice[J]. Cell, 2023, 186: 1-16.
[9] Wang D, Wang H, Xu X, Wang M, Wang Y, Chen H, Ping F, Zhong H, Mu Z, Xie W, Li X, Feng J, Zhang M, Fan Z, Yang T, Zhao J, Liu B, Ruan Y, Zhang G, Liu C, Liu Z. Two complementary genes in a presence-absence variation contribute to indica-japonica reproductive isolation in rice[J]. Nature Communications, 2023, 14: 4531.
[10] Priyadarshi R, Arremsetty H, Singh A, Khandekar D, Ulaganathan K, Shenoy V, Sinha P, Singh V. Marker-assisted improvement of the elite maintainer line of rice, IR 58025B for wide compatibility (S5n) gene[J]. Frontiers in Plant Science, 2018, 20(9): 1051.
[11] Mi J, Li G, Huang J, Yu H, Zhou F, Zhang Q, Ouyang Y, Mou T. Stacking S5n and f5n to overcome sterility in indica-japonica hybrid rice[J]. Theoretical and Applied Genetics, 2016, 129: 563-575.
[12] Mi J, Lei Y, Kim S, Prahalada G D, Ouyang Y, Mou T. An effective strategy for fertility improvement of indica-japonica hybrid rice by pyramiding S5-n, f5-n, and pf12-j[J]. Molecular Breeding, 2019, 39(9): 1-13.
[13] Guo J, Xu X, Li W, Zhu W, Zhu H, Liu Z, Luan X, Dai Z, Liu G, Zhang Z, Zeng R, Tang G, Fu X, Wang S, Zhang G. Overcoming inter-subspecific hybrid sterility in rice by developing indica-compatible japonica lines[J]. Scientific Reports, 2016, 6: 26878.
[14] Yang J, Zhao X, Cheng K, Du H, Ouyang Y, Chen J, Qiu S, Huang J, Jiang Y, Jiang L, Ding J, Wang J, Xu C, Li X, Zhang Q. A killer-protector system regulates both hybrid sterility and segregation distortion in rice[J]. Science, 2012, 337: 1336-1340.
[15] Zhao Z G, Jiang L, Zhang W W, Yu C Y, Zhu S S, Xie K, Tian H, Liu L L, Ikehashi H, Wan J M. Fine mapping of S31, a gene responsible for hybrid embryo-sac abortion in rice (Oryza sativa L.)[J]. Planta, 2007, 226: 1087-1096.
[16] Long Y, Zhao L, Niu B, Su J, Wu H, Chen Y, Zhang Q, Guo J, Zhang C, Mei M, Xia J, Wang L, Wu H, Liu Y G. Hybrid male sterility in rice controlled by interaction between divergent alleles of two adjacent genes[J]. Proceedings of the National Academy of Sciences of the United States of America, 2008, 105(48): 18871-18876.
[17] 杨绍华. 水稻(Oryza sativa L.)籼稻粳杂种花粉不育基因Sb的图位克隆[D]. 广州: 华南农业大学, 2005.
  Yang S H. Map-based cloning the gene Sb for hybrid pollen sterility in japonica-indica crosses of rice (Oryza sativa L.)[D]. Guangzhou: Huanan Agricultural University, 2005. (in Chinese with English abstract)
[18] Hu W, Zhou T, Wang P, Wang B, Song J, Han Z, Chen L, Liu K, Xiong Y. Development of whole-genome agarose-resolvable LInDel markers in rice[J]. Rice, 2020, 13: 1-12.
[19] Shen R, Wang L, Liu X, Wu J, Jin W, Zhao X, Xie X, Zhu Q, Tang H, Li Q, Chen L, Liu Y G. Genomic structural variation-mediated allelic suppression causes hybrid male sterility in rice[J]. Nature Communications, 2017, 8(1): 1310.
[20] Li W, Zeng R, Zhang Z, Ding X, Zhang G. Identification and fine mapping of S-d, a new locus conferring the partial pollen sterility of intersubspecific F1 hybrids in rice (Oryza sativa L.)[J]. Theoretical and Applied Genetics, 2008, 116: 915-922.
[21] 徐晓美. 水稻S-e基因的精细定位及F1花粉不育性的克服[D]. 广州: 华南农业大学, 2012.
  Xu X M. Fine mapping of the S-e gene and overcoming of the pollen sterility of intersubspecific F1hybrid in rice (Oryza sativa L.)[D]. Guangzhou: Huanan Agricultural University, 2012. (in Chinese with English abstract)
[22] Kubo T, Takashi T, Ashikari M, Yoshimura A, Kurata N. Two tightly linked genes at the hsa1 locus cause both F1 and F2 hybrid sterility in rice[J]. Molecular Plant, 2016, 9: 221-232.
[23] Mizuta Y, Harushima Y, Kurata N. Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes[J]. Proceedings of the National Academy of Sciences of the United States of America, 2008, 107(47): 20417-20422.
[24] Kubo T, Yoshimura A. Epistasis underlying female sterility detected in hybrid breakdown in a japonica-indica cross of rice (Oryza sativa L.)[J]. Theoretical and Applied Genetics, 2005, 110: 346-355.
[25] 余传源. 水稻籼粳亚种间杂种优势利用的遗传基础研究[D]. 南京: 南京农业大学, 2006.
  Yu C Y. Study on genetic basis of heterosis exploitation of indica/Japonica inter-subspecific hybrid rice (Oryza sativa L.)[D]. Nanjing: Nanjing Agricultural University, 2006.
[26] Mi J, Li G, Xu C, Yang J, Yu H, Wang G, Li X, Xiao J, Song H, Zhang Q, Ouyang Y. Artificial selection in domestication and breeding prevents speciation in rice[J]. Molecular Plant, 2020, 13: 650-657.
[27] Guo J, Zhou X, Chen K, Ye C, Liu J, Sun K, Tang G, Wang S, Zhang G, Chen Y, Chen D, Liu C. Genetic analysis of S5 regulating the hybrid sterility between indica and japonica subspecies in rice[J]. Agronomy, 2023, 13(4): 1094.
[28] Yu Y, Zhao Z, Shi Y, Tian H, Liu L, Bian X, Xu Y, Zheng X, Gan L, Shen Y, Wang C, Yu X, Wang C, Zhang X, Guo X, Wang J, Ikehashi H, Jiang L, Wan J. Hybrid sterility in rice (Oryza sativa L.) involves the tetratricopeptide repeat domain containing protein[J]. Genetics, 2016, 203: 1439-1451.
[29] Zhu S, Jiang L, Wang C, Zhai H, Li D, Wan J. The Origin of weedy rice Ludao in China deduced by genome wide analysis of its hybrid sterility genes[J]. Breeding Science, 2005, 55: 409-414.
[30] 张桂权, 卢永根, 张华, 杨进昌, 刘桂富. 栽培稻 (Oryza sativa) 杂种不育性的遗传研究: IV. 花粉不育性的基因型[J]. 遗传学报, 1994, 21(1): 34-41.
  Zhang G Q, Lu Y G, Zhang H, Yang J C, Liu G F. Genetic studies on the hybrid sterility in cultivated rice (Oryza sativa): IV. Genotypes for F1 pollen sterility[J]. Acta Genetica Sinica, 1994, 21(1): 34-41. (in Chinese with English abstract)
[31] 林世成, 闵绍楷. 中国水稻品种及其系谱[M]. 上海: 上海科学技术出版社, 1991: 115-164.
  Lin S C, Min S K. Rice Varieties and Their Cenealogy in China[M]. Shanghai: Shanghai Scientific and Technical Publishers, 1991: 115-164. (in Chinese)
[32] Wang P, Qi F, Yao H, Xu X, Li W, Meng J, Zhang Q, Xie W, Xing Y. Fixation of hybrid sterility genes and favorable alleles of key yield-related genes with dominance contribute to the high yield of the Yongyou series of intersubspecific hybrid rice[J]. Journal of Genetics and Genomics, 2002, 49(5): 448-457.
[33] 夏士建, 张启军, 杨杰, 吕川根. 水稻不育系的广亲和基因检测及籼粳分析[J]. 江苏农业学报, 2011, 27(4): 698-703.
  Xia S, Zhang Q, Yang J, Lü C. Identification of S5-n gene and subspecies classification of indica and japonica in rice male sterile line[J]. Jiangsu Journal of Agricultural Sciences, 2011, 27(4): 698-703. (in Chinese with English abstract)
[34] 邢运高, 王宝祥, 陈庭木, 杨波, 刘艳, 徐波, 孙志广, 迟铭, 李健, 李景芳, 方兆伟, 卢百关, 徐大勇. 两系亚种间杂交水稻组合的产量和品质性状杂种优势分析[J]. 江苏农业学报, 2021, 49(1): 59-63.
  Xin Y G, Wang B X, Chen T M, Yang B, Liu Y, Xu B, Sun Z G, Chi M, Li J, Li J F, Fang Z W, Lu B G, Xu D Y. Heterosis analysis of yield and quality characters of two-line indica-japonica hybrid combination[J]. Jiangsu Journal of Agricultural Sciences, 2021, 49(1): 59-63. (in Chinese with English abstract)
文章导航

/

浙ICP备05004719号-5
公安备案号:33010302003356
地址:浙江省杭州市富阳区水稻所路28号 邮编:311400 电话:0571-63370278 E-mail:cjrs@263.net
本系统由北京玛格泰克科技发展有限公司设计开发
总访问量: 今日访问: 在线人数: