水稻落粒性的研究进展

展开
  • 1广东省植物分子育种重点实验室,广州510642
    2亚热带农业生物资源保护与利用国家重点实验室,广州510642
*通讯联系人,E-mail: luanxin@scau.edu.cn

收稿日期: 2019-04-01

  修回日期: 2019-07-18

  网络出版日期: 2019-11-10

基金资助

国家重点研发计划资助项目(2016YFD0100406);广东特支计划资助项目(2016TX03N224)

Research Progress on Rice Shattering

Expand
  • 1Guangdong Provincial Key Laboratory of Plant Molecular Breeding, Guangzhou 510642, China
    2State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangzhou 510642, China
*Corresponding author, E-mail: luanxin@scau.edu.cn

Received date: 2019-04-01

  Revised date: 2019-07-18

  Online published: 2019-11-10

摘要

落粒性是野生稻适应自然环境和保持群体繁衍的重要性状,落粒性的丧失是水稻驯化过程中的一个关键事件。落粒程度既直接影响水稻的产量,也影响其对现代化机械收割方式的适应性。本文综述了近年来水稻落粒性的研究进展,包括水稻落粒的生理基础、落粒性基因的定位与克隆,以及调控落粒性的分子机理。

关键词: 水稻; 落粒性; 离层; 驯化

本文引用格式

苟亚军, 杨维丰, 林少俊, 高彦昊, 栾鑫 . 水稻落粒性的研究进展[J]. 中国水稻科学, 2019 , 33(6) : 479 -488 . DOI: 10.16819/j.1001-7216.2019.9038

Abstract

Seed shattering is one of the most important traits in wild rice. As an adaptation to the natural environment and the propagation of their offspring, the loss of seed shattering in rice has been a main target during plant selection and domestication. The seed shattering has a direct impact on the yield of rice and the way of its mechanical harvest. The review covers the current advances that have substantially deepen our understanding on seed shattering, such as the physiologic basis responsible for the seed shattering, the identification of crucial genes controlling this trait and the genetic mechanism underlying seed shattering in rice.

参考文献

[1] Doebley J F, Gaut B S, Smith B D.The molecular genetics of crop domestication.Cell, 2006, 127(7): 1309-1321.
[2] Konishi S, Izawa T, Lin S Y, Ebana K, Fukuta Y, Sasaki T, Yano M.An SNP caused loss of seed shattering during rice domestication.Science, 2006, 312: 1392-1396.
[3] Ishii T, Numaguchi K, Miura K, Yoshida K, Thanh P T, Htun T M, Yamasaki M, Komeda N, Matsumoto T, Terauchi R, Ishikawa R, Ashikari M.OsLG1 regulates a closed panicle trait in domesticated rice. Nat Genet, 2013, 45(4): 462-465.
[4] Li C, Zhou A, Sang T.Rice domestication by reducing shattering.Science, 2006, 311(5769): 1936-1939.
[5] Estornell L H, Agustí J, Merelo P, Talón M, Tadeo F R. Elucidating mechanisms underlying organ abscission. Plant Sci, 2013, 199-200: 48-60.
[6] Purugganan M D, Fuller D Q.The nature of selection during plant domestication.Nature, 2009, 457(7231): 843-848.
[7] 李仕贵, 马玉清, 何平, 黎汉云, 陈英, 周开达, 朱立煌. 水稻籼粳杂交落粒性的遗传分析和基因定位. 西南农业学报, 1999, 12(S2): 77-80.
[7] Li S G, Ma Y Q, He P, Li H Y, Chen Y, Zhou K D, Zhu L H.Genetic analysis and mapping the shattering habit in rice (Oryza sativa L.). Southwest China J Agric Sci, 1999, 12(S2): 77-80. (in Chinese with English abstract)
[8] 朱立宏, 顾铭洪. 水稻落粒性的遗传. 遗传, 1979, 1(4): 17-19.
[8] Zhu L H, Gu M H.Inheritance of shattering in rice.Hereditas, 1979, 1(4): 17-19. (in Chinese)
[9] Lee G H, Kang I K, Kim K M.Mapping of novel QTL regulating grain shattering using doubled haploid population in rice (Oryza sativa L.). Int J Genom, 2016, 2016: 1-8.
[10] Balanzà V, Roig-Villanova I, Marzo M D, Masiero S, Colombo L.Seed abscission and fruit dehiscence required for seed dispersal rely on similar genetic networks.Development, 2016, 143(18): 3372-3381.
[11] Oba S, Sumi N, Fujimoto F, Yasue T.Association between grain shattering habit and formation of abscission layer controlled by grain shattering gene sh-2 in rice(Oryza sativa L.). Jpn J Crop Sci, 1995, 64(3): 607-615.
[12] Roberts J A, Whitelaw C A, Gonzalez-Carranza Z H, Mcmanus M T. Cell separation processes in plants-models, mechanisms and manipulation.Annals Bot, 2000, 86(2): 223-235.
[13] Patterson S E,. Cutting Loose.Abscission and dehiscence in Arabidopsis. Plant Physiol, 2001, 126(2): 494-500.
[14] Ji H S, Chu S H, Jiang W Z, Cho Y, Hahn J H, Eun M Y, McCouch S R, Koh H J. Characterization and mapping of a shattering mutant in rice that corresponds to a block of domestication genes.Genetics, 2006, 173(2): 995-1005.
[15] Wu W G, Liu X Y, Wang M H, Meyer R S, Luo X J, Ndjiondjop M N, Tan L B, Zhang J W, Wu J Z, Cai H W, Sun C Q, Wang X K, Wing R A, Zhu Z F.A single- nucleotide polymorphism causes smaller grain size and loss of seed shattering during African rice domestication.Nat Plants, 2017, 3(6):17064.
[16] 应存山. 中国稻种资源. 北京: 中国农业科技出版社, 1993.
[16] Ying C S.Rice Germplasm Resources in China. Beijing: China Agricultural Science and Technology Press, 1993. (in Chinese)
[17] 朱子超, 王楚桃, 何永歆, 蒋刚, 欧阳杰, 黄乾龙, 李贤勇. 水稻落粒性的遗传分析和基因定位. 杂交水稻, 2014, 29(1): 62-66.
[17] Zhu Z C, Wang C T, He Y X, Jiang G, Ouyang J, Huang Q L, Li X Y.Genetic analysis and molecular mapping of seed shattering in rice.Hybrid Rice, 2014, 29(1): 62-66. (in Chinese with English abstract)
[18] 沈圣泉, 庄杰云, 王淑珍, 包劲松, 郑康乐, 舒庆尧, 夏英武. 籼稻落粒性QTL定位与环境互作效应检测. 分子植物育种, 2004, 2(5): 627-632.
[18] Shen S Q, Zhuang J Y, Wang S Z, Bao J S, Zheng K L, Shu Q Y, Xia Y W.Mapping QTLs for rice shattering trait and analysis major effects.Mol Plant Breeding, 2004, 2(5): 627-632. (in Chinese with English abstract)
[19] 朱文银, 朱镇, 杨德卫, 林静, 赵凌, 张亚东, 陈涛, 王才林. 一个水稻落粒性基因SH1的SSR标记定位. 中国农学通报, 2008, 24(8): 84-87.
[19] Zhu W Y, Zhu Z, Yang D W, Lin J, Zhao L, Zhang Y D, Chen T, Wang C L.Mapping of SH1, a dominant gene controlling seed shattering using SSR markers. Chin Agric Sci Bull, 2008, 24(8): 84-87. (in Chinese with English abstract)
[20] Zhou Y, Lu D F, Li C Y, Luo J H, Zhu B F, Zhu J J, Shangguan Y Y, Wang Z X, Sang T, Zhou B, Han B.Genetic control of seed shattering in rice by the APETALA2 transcription factor SHATTERING ABORTION1. Plant Cell, 2012, 24(3): 1034-1048.
[21] Fukuta Y, Yagi T.Mapping of a shattering resistance gene in a mutant line SR-5 induced from an indica rice variety, Nanjing 11. Breeding Sci, 1998, 48: 345-348.
[22] Xiong L Z, Liu K D, Dai X K, Xu C G, Zhang Q F.Identification of genetic factors controlling domestication -related traits of rice using an F2 population of a cross between Oryza sativa and O. rufipogon. Theor Appl Genet, 1999, 98(2): 243-251.
[23] Cai H W, Morishima H.Genomic regions affecting seed shattering and seed dormancy in rice.Theor Appl Genet, 2000, 100(6): 840-846.
[24] Bres-Patry C, Lorieux M, Clément G, Bangratz M, Ghesquière A.Heredity and genetic mapping of domestication-related traits in a temperatejaponica weedy rice. Theor Appl Genet, 2001, 102(1): 118-126.
[25] Thomson M J, Tai T H,McClung A M, Lai X H, Hinga M E, Lobos K B, Xu Y, Martinez C P, McCouch S R. Mapping quantitative trait loci for yield, yield components and morphological traits in an advanced backcross population between Oryza rufipogon and the Oryza sativa cultivar Jefferson. Theor Appl Genet, 2003, 107(3): 479-493.
[26] Gu X Y, Kianian S F, Hareland G A, Hoffer B L, Foley M E.Genetic analysis of adaptive syndromes interrelated with seed dormancy in weedy rice (Oryza sativa). Theor Appl Genet, 2005, 110(6): 1108-1118.
[27] Lee S J, Oh C S, Suh J P,McCouch S R, Ahn S N. Identification of QTLs for domestication-related and agronomic traits in an Oryza sativa× O. rufipogon BC1F7 population. Plant Breeding, 2005, 124(3): 209-219.
[28] 许旭明, 周元昌, 吴为人. 利用分子标记定位籼稻落粒性QTL. 福建农林大学学报: 自然版, 2005, 34(3): 11-18.
[28] Xu X M, Zhou Y C, Wu W R.Mapping of QTLs underlying shattering habit in indica rice using molecular markers. J Fujian Agric For Univ: Nat Sci Ed, 2005, 34(3): 11-18. (in Chinese with English abstract)
[29] Li C, Zhou A, Sang T.Genetic analysis of rice domestication syndrome with the wild annual species,Oryza nivara. New Phytol, 2006, 170(1): 185-193.
[30] Lin Z W, Griffith M E, Li X R, Zhu Z F, Tan L B, Fu Y C, Zhang W X, Wang X K, Xie D X, Sun C Q.Origin of seed shattering in rice (Oryza sativa L.). Planta, 2007, 226(1): 11-20.
[31] Onishi K, Horiuchi Y, Ishigoh-Oka N, Takagi K, Ichikawa N, Maruoka M, Sano Y.A QTL cluster for plant architecture and its ecological significance in Asian wild rice.Breeding Sci, 2007, 57(1): 7-16.
[32] 朱文银, 杨德卫, 林静, 赵凌, 张亚东, 朱镇, 陈涛, 王才林. 利用染色体片段置换系定位水稻落粒性主效QTL. 植物学通报, 2008, 25(4): 443-448.
[32] Zhu W Y, Yang D W, Lin J, Zhao L, Zhang Y D, Zhu Z, Chen T, Wang C L.Substitution mapping of quantitative trait loci for seed shattering in chromosome segment substitution lines of rice (Oryza sativa L.). Chin Bull Bot, 2008, 25(4): 443-448. (in Chinese with English abstract)
[33] Qin Y, Kim S M, Zhao X H, Jia B Y, Lee H S, Kim K M, Eun M Y, Jin I D, Sohn J K.Identification for quantitative trait loci controlling grain shattering in rice.Genes & Genom, 2010, 32(2): 173-180.
[34] Subudhi P K, Singh P K, DeLeon T, Parco A, Karan R, Biradar H, Cohn M A, Sasaki T. Mapping of seed shattering loci provides insights into origin of weedy rice and rice domestication.J Hered, 2013, 105(2):276-287.
[35] Htun T M, Inoue C, Chhourn O, Ishii T, Ishikawa R.Effect of quantitative trait loci for seed shattering on abscission layer formation in Asian wild rice Oryza rufipogon. Breeding Sci, 2014, 64: 199-205.
[36] Yao N, Wang L, Yan H X, Liu Y S, Lu B R.Mapping quantitative trait loci (QTL) determining seed-shattering in weedy rice: Evolution of seed shattering in weedy rice through de-domestication.Euphytica, 2015, 204(3): 513-522.
[37] Cheng J P, He Y Q, Zhan C F, Yang B, Xu E S, Zhang H S, Wang Z F.Identification and characterization of quantitative trait loci for shattering in rice landrace jiucaiqing from Taihu Lake Valley, China.Plant Genom, 2016, 9(3): 1-9.
[38] 郑丽媛, 魏霞, 周可, 向佳, 李燕, 刘宝玉, 何光华, 凌英华, 赵芳明. 携带主效落粒基因的水稻染色体片段代换系Z481的鉴定及SH6(t)定位. 科学通报, 2016, 61(7): 748-758.
[38] Zheng L Y, Wei X, Zhou K, Xiang J, Li Y, Liu B Y, He G H, Ling Y H, Zhao F M.Identification of a rice chromosome segment substitution line Z481 carrying a major gene for seed shattering and mapping of SH6(t). Chin Sci Bull, 2016, 61(7): 748-758. (in Chinese with English abstract)
[39] Li F, Numa H, Hara N, Sentoku N, Ishii T, Fukuta Y, Nishimura N, Kato H. Identification of a locus for seed shattering in rice(Oryza sativa L.) by combining bulked segregant analysis with whole-genome sequencing. Mol Breeding, 2019, 39: 36.
[40] Sun P Y, Zhang W H, Wang Y H, He Q, Shu F, Liu H, Wang J, Wang J M, Yuan L P, Deng H F.OsGRF4 controls grain shape, panicle length and seed shattering in rice. J Integ Plant Biol, 2016, 58(10): 836-847.
[41] Lin Z W, Li X R, Shannon L M, Yeh C T, Wang M L, Bai G H, Peng Z, Li J R, Trick H N, Clemente T E, Doebley J, Schnable P S, Tuinstra M R, Tesso T T, White F, Yu J M.Parallel domestication of the Shattering1 genes in cereals. Nat Genet, 2012, 44(6): 720-724.
[42] Cao H S, Zhuo L, Su Y, Sun L X, Wang X M.Non- specific phospholipase C1 affects silicon distribution and mechanical strength in stem nodes of rice.Plant J, 2016, 86(4): 308-321.
[43] Lv S W, Wu W G, Wang M H, Meyer R S, Ndjiondjop M N, Tan L B, Zhou H Y, Zhang J W, Fu Y C, Cai H W, Sun C Q, Wing R A, Zhu Z F.Genetic control of seed shattering during African rice domestication.Nat Plants, 2018, 4: 331-337.
[44] Lee J, Park J J, Kim S L, Yim J, An G.Mutations in the rice liguleless gene result in a complete loss of the auricle, ligule, and laminar joint.Plant Mol Biol, 2007, 65(4): 487-499.
[45] Yoon J, Cho L H, Kim S L, Choi H, Koh H J, An G.The BEL1-type homeobox gene SH5 induces seed shattering by enhancing abscission-zone development and inhibiting lignin biosynthesis. Plant J, 2014, 79(5): 717-728.
[46] Ji H, Kim S R, Kim Y H, Kim H, Eun M Y, Jin I D, Cha Y S, Yun D W, Ahn B O, Lee M C, Lee G S, Yoon U H, Lee J S, Lee Y H, Suh S C, Jiang W Z, Yang Z II, Jin Ping, McCouch S R, An G, Koh H J. Inactivation of the CTD phosphatase-like gene OsCPL1 enhances the development of the abscission layer and seed shattering in rice. Plant J, 2010, 61(1): 96-106.
[47] Jiang L Y, Ma X, Zhao S S, Tang Y Y, Liu F X, Gu P, Fu Y C, Zhu Z F, Cai H W, Sun C Q, Tan L B.The APETALA2-Like transcription factor SUPERNUMERA RY BRACT controls rice seed shattering and seed size. Plant Cell, 2019, 31(1): 17-36.
[48] 刘强, 张贵友, 陈受宜. 植物转录因子的结构与调控作用. 科学通报, 2000, 45(14): 1465-1474.
[48] Liu Q, Zhang G Y, Chen S Y.Structure and regulation of plant transcription factors.Chin Sci Bull, 2000, 45(14): 1465-1474. (in Chinese)
[49] Roeder A H K, Ferrándiz C, Yanofsky M F. The role of the REPLUMLESS homeodomain protein in patterning the Arabidopsis fruit. Curr Biol, 2003, 13(18): 1630-1635.
[50] Arnaud N, Lawrenson T, Østergaard L, Sablowski R.The same regulatory point mutation changed seed-dispersal structures in evolution and domestication.Curr Biol, 2011, 21(14): 1215-1219.
[51] Zhang L, Liu D M, Wang D, Zhang R Z, Geng S F, Wu L, Li A L, Mao L.Over expression of the wheat BEL1-like gene TaqSH1 affects floral organ abscission in Arabidopsis thaliana. J Plant Biol, 2013, 56(2): 98-105.
[52] Wei X, Qiao W H, Chen Y T, Wang R S, Cao L R, Zhang W X, Yuan N N, Li Z C, Zeng H L, Yang Q W.Domestication and geographic origin of Oryza sativa in China: insights from multilocus analysis of nucleotide variation of O.sativa and O.rufipogon. Mol Ecol, 2012, 21(20): 5073-5087.
[53] Meyer R S, Choi J Y, Sanches M, Plessis A, Flowers J M, Amas J, Dorph K, Barretto A, Gross B, Fuller D Q, Bimpong I K, Ndjiondjop M N, Hazzouri K M, Gregorio G B, Purugganan M D.Domestication history and geographical adaptation inferred from a SNP map of African rice.Nat Genet, 2016, 48(9): 1083-1088.
[54] Win K T, Yamagata Y, Doi K, Uyama K, Naga i Y, Toda Y, Kani T, Ashikari M, Yasui H, Yoshimura A. A single base change explains the independent origin of and selection for the nonshattering gene in African rice domestication.New Phytol, 2017, 213(4): 1925-1935.
[55] Ripoll J J,Roeder A H K, Ditta G S, Yanofsky M F. A novel role for the floral homeotic gene APETALA2 during Arabidopsis fruit development. Development, 2011, 138(23): 5167-5176.
[56] Simons K J, Fellers J P, Trick H N, Zhang Z C, Tai Y S, Gill B S, Faris J D.Molecular characterization of the major wheat domestication gene Q. Genetics, 2006, 172(1): 547-555.
[57] Hammer K,. Das Domestikationssyndrom.Die Kulturp flanze. 1984, 32(1): 11-34.
[58] Zhang L B, Zhu Q H, Wu Z Q, Ross-Ibarra J, Gaut B S, Ge S, Sang T.Selection on grain shattering genes and rates of rice domestication.New Phytol, 2009, 184(3): 708-720.
[59] Causse M A, Fulton T M, Cho Y G, Ahn S N, Chunwongse J, Wu K, Xiao J, Yu Z, Ronald P C, Harrington S E.Saturated molecular map of the rice genome based on an interspecific backcross population.Genetics, 1995, 138: 1251-1274.
[60] 区树俊, 汪鸿儒, 储成才. 亚洲栽培稻主要驯化性状研究进展. 遗传, 2012, 34(11): 1379-1389.
[60] Ou S J, Wang H R, Chu C C.Major domestication traits in Asian rice.Hereditas, 2012, 34(11): 1379-1389. (in Chinese with English abstract)
[61] Nagamura Y, Antonio B A, Sato Y, Miyao A, Namiki N, Yonemaru J I, Minami H, Kamatsuki K, Shimura K, Shimizu Y, Hirochika H.Rice TOGO Browser: A platform to retrieve integrated information on rice functional and applied genomics.Plant & Cell Physiol, 2011, 52(2): 230-237.
[62] International Rice Genome Sequencing Project. The map-based sequence of the rice genome.Nature, 2005, 436: 793-800.
[63] Li X T, Xie Y Y, Zhu Q L, Liu Y G.Targeted genome editing in genes and cis-regulatory regions improves qualitative and quantitative traits in crops. Mol Plant, 2017, 10(11): 1368-1370.
[64] Hu X X, Wang C, Fu Y P, Liu Q, Jiao X Z, Wang K J.Expanding the range of CRISPR/Cas9 genome editing in rice.Mol Plant, 2016, 9(6): 943-945.
文章导航

/

浙ICP备05004719号-5
公安备案号:33010302003356
地址:浙江省杭州市富阳区水稻所路28号 邮编:311400 电话:0571-63370278 E-mail:cjrs@263.net
本系统由北京玛格泰克科技发展有限公司设计开发
总访问量: 今日访问: 在线人数: