研究报告

利用CRISPR/Cas9系统定向编辑水稻SD1基因

展开
  • 1上海市农业科学院作物育种栽培研究所, 上海 201403
    2江西农业大学农学院, 南昌 330045
    3上海海洋大学食品学院, 上海 201306
*通讯联系人, E-mail: chuhuangwei@saas.sh.cn; clm079@163.com

收稿日期: 2017-09-01

  修回日期: 2017-12-27

  网络出版日期: 2018-05-10

基金资助

上海市科技兴农重点攻关计划资助项目(沪农科攻字2014第7-1-2号);上海市浦江人才计划资助项目(16PJ1408900);上海市种业发展计划资助项目(沪农科种字2016第1-3号)

Targeted Editing of Rice SD1 Gene UsingCRISPR/Cas9 System

Expand
  • 1Institute of Crop Breeding and Cultivation, Shanghai Academy of Agricultural Sciences, Shanghai 201403, China
    2School of Agricultural Sciences, Jiangxi Agricultural University, Nanchang 330045,China
    3College of Food Sciences & Technology, Shanghai Ocean University, Shanghai 201306, China;
*Corresponding author, E-mail: chuhuangwei@saas.sh.cn; clm079@163.com

Received date: 2017-09-01

  Revised date: 2017-12-27

  Online published: 2018-05-10

摘要

【目的】半矮秆水稻品种的选育和应用是水稻育种的最重大成果之一。半矮秆品种大多是半矮秆基因SD1(semi-dwarf1)功能缺失突变体,为了获得sd1突变体,本研究对SD1基因进行了定向编辑。【方法】利用CRISPR/Cas9系统,以SD1基因为靶基因,构建基因编辑载体CRISPR-SD1,用农杆菌介导的方法转化水稻恢复系申繁17和申繁24。【结果】在2个转化受体的T0代均获得了纯合的sd1突变体,并且在T1代株系中分离出了不含转基因序列的植株。2个品种的sd1突变体与各自的野生型相比,株高分别下降了25%左右。【结论】利用CRISPR/Cas9系统可以有效地对目的基因进行编辑,在水稻分子育种领域具有巨大的应用价值。

本文引用格式

胡雪娇, 杨佳, 程灿, 周继华, 牛付安, 王新其, 张美良, 曹黎明, 储黄伟 . 利用CRISPR/Cas9系统定向编辑水稻SD1基因[J]. 中国水稻科学, 2018 , 32(3) : 219 -225 . DOI: 10.16819/j.1001-7216.2018.7106

Abstract

【Objective】In the last century, the usage of semi-dwarfrice varieties brought about significant improvements and great achievements inrice breeding.Most of the semi-dwarfrice varieties have loss-of-function mutations in the Semi-Dwarf1 (SD1) gene.In order to obtain sd1 mutant, targeted editing of SD1 gene was performed. 【Method】SD1 gene editing vector CRISPR-SD1 was constructed by using CRISPR/Cas9 system, and transformed into two rice restore linesShenfan17 and Shenfan24 by the Agrobacterium-mediated method.【Result】 Homozygous sd1 mutants were obtained in T0 generation in both varieties, and vector-free sd1 mutant lines were segregated from the T1 population. The plant heights of the two sd1 mutants were decreased by 25% as compared with those of their wild types. 【Conclusion】CRISPR/Cas9 is a powerful tool for rice target gene editing, and has enormous potential in rice molecular breeding.

参考文献

[1] Doebley J F, Gaut B S, Smith B D.The molecular genetics of crop domestication.Cell, 2006, 127(7): 1309-1321.
[2] Liu Q, Xu X, Ren X, Fu H, Wu D, Shu Q.Generation and characterization of low phytic acid germplasm in rice ( Oryza sativa L.).Theor Appl Genet, 2007, 114(5): 803-814.
[3] Cho S W, Kim S, Kim J M, Kim J S.Targeted genome engineering in human cells with the Cas9 RNA-guided endonuclease.Nat Biotechnol, 2013, 31(3): 230-232.
[4] Cong L, Ran F A, Cox D, Lin S, Barretto R, Habib N, Hsu P D, Wu X, Jiang W, Marraffini L A, Zhang F.Multiplex genome engineering using CRISPR/Cas systems. Science, 2013, 339(6121): 819-23.
[5] Jinek M, East A, Cheng A, Lin S, Ma E, Doudna J.RNA-programmed genome editing in human cells.Elife, 2013, 2: e00471.
[6] Mali P, Aach J, Stranges P B, Esvelt K M, Moosburner M, Kosuri S, Yang L, Church G M.CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering.Nat Biotechnol, 2013, 31(9): 833-838.
[7] Mani M, Kandavelou K, Dy F J, Durai S, Chandrasegaran S.Design, engineering, and characterization of zinc finger nucleases.Biochem Biophys Res Commun, 2005, 335(2): 447-457.
[8] Bogdanove A J, Voytas D F.TAL effectors: Customizable proteins for DNA targeting.Science, 2011, 333(6051): 1843-1846.
[9] Samanta M K, Dey A, Gayen S.CRISPR/Cas9: An advanced tool for editing plant genomes.Transgenic Res, 2016, 25(5): 561-573.
[10] Mao Y, Zhang H, Xu N, Zhang B, Gou F, Zhu J K.Application of the CRISPR-Cas system for efficient genome engineering in plants.Mol Plant, 2013, 6(6): 2008-2011.
[11] Shan Q, Wang Y, Li J, Zhang Y, Chen K, Liang Z, Zhang K, Liu J, Xi J J, Qiu J L, Gao C.Targeted genome modification of crop plants using a CRISPR-Cas system.Nat Biotechnol, 2013, 31(8): 686-688.
[12] Jiang W Z, Zhou H B, Bi H H, Fromm M, Yang B, Weeks D P.Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice.Nucleic Acids Res, 2013, 41(20): e188.
[13] Liang Z, Zhang K, Chen K, Gao C.Targeted mutagenesis in Zea mays using TALENs and the CRISPR/Cas system.J Genet Genom, 2014, 41(2): 63-68.
[14] Wang Y, Cheng X, Shan Q, Zhang Y, Liu J, Gao C, Qiu J L.Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew.Nat Biotechnol, 2014, 32(9): 947-951.
[15] Jacobs T B, LaFayette P R, Schmitz R J, Parrott W A. Targeted genome modifications in soybean with CRISPR/Cas9.BMC Biotechnol, 2015, 15: 16.
[16] Li Z, Liu Z B, Xing A, Moon B P, Koellhoffer J P, Huang L, Ward R T, Clifton E, Falco S C, Cigan A M.Cas9-Guide RNA directed genome editing in soybean.Plant Physiol, 2015, 169(2): 960-970.
[17] Sun X, Hu Z, Chen R, Jiang Q, Song G, Zhang H, Xi Y.Targeted mutagenesis in soybean using the CRISPR-Cas9 system.Sci Rep, 2015, 5: 10342.
[18] Brooks C, Nekrasov V, Lippman Z B, Van Eck J.Efficient gene editing in tomato in the first generation using the clustered regularly interspaced short palindromic repeats/CRISPR-associated9 system.Plant Physiol, 2014, 166(3): 1292-1297.
[19] Zhang H, Zhang J, Wei P, Zhang B, Gou F, Feng Z, Mao Y, Yang L, Zhang H, Xu N, Zhu J K.The CRISPR/Cas9 system produces specific and homozygous targeted gene editing in rice in one generation.Plant Biotechnol J, 2014, 12(6): 797-807.
[20] Monna L, Kitazawa N, Yoshino R, Suzuki J, Masuda H, Maehara Y, Tanji M, Sato M, Nasu S, Minobe Y.Positional cloning of rice semidwarfing gene,sd-1: Rice “Green Revolution Gene” encodes a mutant enzyme involved in gibberellin synthesis. DNA Res, 2002, 9(1): 11-17.
[21] Spielmeyer W, Ellis M H, Chandler P M.Semidwarf (sd-1), “green revolution” rice, contains a defective gibberellin 20-oxidase gene. Proc Natl Acad Sci USA, 2002, 99(13): 9043-9048.
[22] Sasaki A, Ashikari M, Ueguchi-Tanaka M, Itoh H, Nishimura A, Swapan D, Ishiyama K, Saito T, Kobayashi M, Khush G S, Kitano H, Matsuoka M.Green revolution: A mutant gibberellin-synthesis gene in rice.Nature, 2002, 416(6882): 701-702.
[23] 谷福林, 翟虎渠, 万建民, 张红生. 水稻矮秆性状研究及矮源育种利用. 江苏农业学报, 2003, 19(1): 48-54.
[23] Gu F L, Zhai H Q, Wan L M, Zhang H S.Study on Inheritance of dwarf character and its utilization in rice(Oryza sativa L.) breeding. Jiangsu JAgric Sci, 2003, 19(1):48-54. (in Chinese with English abstract)
[24] Asano K, Yamasaki M, Takuno S, Miura K, Katagiri S, Ito T, Doi K, Wu J, Ebana K, Matsumoto T, Innan H, Kitano H, Ashikari M, Matsuoka M. Artificial selection for a green revolution gene during japonica rice domestication.Proc Natl Acad Sci USA#, 2011, 108(27): 11034-11039.
[25] Yan M, Zhou S R, Xue H W.CRISPR Primer Designer: Design primers for knockout and chromosome imaging CRISPR-Cas system.J Integr Plant Biol, 2015, 57(7): 613-617.
[26] Qiao F, Zhao K J.The Influence of RNAi targeting of OsGA20ox2gene on plant height in rice. Plant Mol Biol Rep, 2011, 29(4): 952.
[27] Harrison M M, Jenkins B V, O’Connor-Giles K M, Wildonger J. A CRISPR view of development.Genes Dev, 2014, 28(17): 1859-1872.
文章导航

/

浙ICP备05004719号-5
公安备案号:33010302003356
地址:浙江省杭州市富阳区水稻所路28号 邮编:311400 电话:0571-63370278 E-mail:cjrs@263.net
本系统由北京玛格泰克科技发展有限公司设计开发
总访问量: 今日访问: 在线人数: