研究报告

用SSR标记评估东北三省水稻推广品种的遗传多样性

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  • 沈阳农业大学 水稻研究所/农业部作物生理生态与遗传育种重点开放实验室/辽宁省北方粳稻育种重点实验室, 辽宁 沈阳 110161; *通讯联系人, E-mail: xuzhengjin@126.com

收稿日期: 1900-01-01

  修回日期: 1900-01-01

  网络出版日期: 2009-07-10

Evaluation on Genetic Diversity of the Commercial Rice Varieties in Northeast China by Microsatellite Markers

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  • Rice Institute, Shenyang Agricultural University/Key Laboratory of Crop Physiology, Ecology, Genetics and Breeding, Ministry of Agriculture/Key Laboratory of Northern Japonica Rice Breeding of Liaoning, Shenyang 110161, China; *Corresponding author, E-mail: xuzhengjin@126.com

Received date: 1900-01-01

  Revised date: 1900-01-01

  Online published: 2009-07-10

摘要

利用53个SSR标记和24个表型性状分析东北三省107个水稻推广品种,探讨东北水稻推广品种群体遗传多样性及不同育成年代、省份间的遗传多样性和互补性。结果表明,表型遗传多样性高于DNA水平,年代间表型与微卫星标记的遗传多样性具有较高的相似性,而地区间无明显相似性。东北水稻推广品种遗传多样性比较狭窄,随着时间推移增加的新等位基因多于消失的旧等位基因数。三省水稻推广品种遗传多样性呈现黑龙江>吉林>辽宁的趋势,但由于地区间频繁引种,东北水稻品种在区域上的遗传分化已不明显,其差异主要来源于品种间的基因型差异。不同省份存在较多的互补等位变异,最多的在黑龙江和辽宁之间。不同省份和不同年代间分别拥有各自特有和特缺的等位变异。参试品种可分为5个类群,每一类群均有两个以上年代(省份)品种分布。

本文引用格式

李红宇,侯昱铭,陈英华,徐正进,陈温福,赵明辉,马殿荣,徐 海,王嘉宇 . 用SSR标记评估东北三省水稻推广品种的遗传多样性
[J]. 中国水稻科学, 2009
, 23(4) : 383 -390 . DOI: 10.3969/j.issn.1001-7216.2009.04.08

Abstract

Twentyfour phenotypic traits and 53 SSR markers were used to reveal the genetic diversity of 107 commercial rice varieties in Northeast China. The phenotypic genetic diversity was higher than that at DNA level. Among varieties in different released years,there was high similarity in genetic diversity between morphological markers and SSR markers, but no similarity in genetic diversity among varieties from different provinces. There existed a scarcity of genetic diversity in the Northeast China commercial rice population. With advance of years, some old alleles disappeared and some new ones appeared, and the new ones were more than the old ones. Genetic diversity of commercial rice varieties in the Northeast China was in the order of Heilongjiang> Jilin> Liaoning. Because of frequent interregional introduction of varieties, the genetic differentiation was not obvious among regions, and mainly came from genotype difference among varieties. There were some mutual complementary alleles among provincial subpopulations, with the largest number between Heilongjiang and Liaoning. There existed or lacked some specific alleles among varieties in different provinces and years. The commercial rice varieties in Northeast China were clustered into 5 groups and each group included the varieties in at least two periods or provinces.

参考文献

[1]齐永文, 张冬玲, 张洪亮, 等. 中国水稻选育品种遗传多样性及其近50年变化趋势. 科学通报, 2006, 51: 693-699.
[2]Roussel Ⅴ, Koenig J, Beckt M, et al. Molecular diversity in French bread wheat accessions related to temporal trends and breeding programmes. Theor Appl Genet, 2004, 108: 920-930.
[3]Fu Y B, Peterson G W, Scoles G, et al. Allelic diversity changes in 96 Canadian oat cultivars released from 1886 to 2001. Crop Sci, 2003, 43: 1989-1995.
[4]Clerc V L, Bazante F, Baril C, et al. Assessing temporal changes in genetic diversity of maize varieties using microsatellite markers. Theor Appl Genet, 2005, 110: 294-302.
[5]Petra O, Catherine C B, Ralf S P. A genetic analysis of quantitative resistance to late blight in potato: Towards markerassisted selection. Mol Breeding, 1999, 5: 399-415.
[6]邓华凤, 何强, 舒服, 等. 中国杂交粳稻研究现状与对策. 杂交水稻, 2006, 21(1): 1-6.
[7]徐正进, 邵国军, 韩勇, 等. 东北三省水稻产量和品质及其与穗部性状关系的初步研究. 作物学报, 2006, 32(12): 1878-1883.
[8]熊振民, 蔡洪法. 中国水稻. 北京: 中国农业科技出版社, 1992: 50-200.
[9]Sun C Q, Wang X K, Li Z C, et al. Comparison of the genetic diversity of common wild rice (Oryza rufipogon Griff.) and cultivated rice (Oryza sativa L.) using RFLP markers. Theor Appl Genet, 2001, 102: 157-162.
[10]Virk P, FordLloyd B V, Jackson M T, et al. The use of RAPD for the study of diversity within germplasm collections. Heredity, 1996, 74: 170-179.
[11] 陈永军, 谢崇华, 张景荣, 等. 爪哇稻Wanilava细胞质雄性不育系的创建及AFLP指纹图谱分析. 中国水稻科学, 2008, 22(1): 28-32.
[12]华蕾, 袁筱萍, 余汉勇, 等.我国水稻主栽品种SSR多样性的比较分析.中国水稻科学, 2007, 21(2): 150-154.
[13]韩龙植. 水稻种质资源描述规范和数据标准. 北京: 中国农业出版社, 2006: 66-73.
[14]SaghiMaroof M A, Soliman K M, Jorgensen A R, et al. Ribisinal DNA space length polymorphism in barley: Mendelian inheritance, chromosomal location and population dynamics. Proc Natl Acad Sci USA, 1984, 81: 8014-8018.
[15]Panaud O, Chen X L, McCouch S R. Development of microsatel lite markers and characterization of simple sequence length polymorphism (SSLP) in rice (Oryza sativa L). Mol Gen Genet, 1996, 252: 597-607.
[16]Sheldon A L. Equitability indices: Dependence on the species count. Ecology, 1969, 50: 466-467.
[17]Nei M, Tajima F A, Tateno Y. Accuracy of estimated phylogenetic trees from molecular data. J Mol Evol, 1983, 19: 153-170.
[18]Takezaki N, Nei M. Genetic distances and reconstruction of phylogenetic trees from microsatellite DNA. Genetics, 1996, 144: 389-399.
[19]Nei M. Analysis of diversity in subdivided populations. Proc Natl Acad Sci USA, 1973, 70: 3321--3323.
[20]张军, 赵团结, 盖钧镒. 中国东北大豆育成品种遗传多样性和群体遗传结构分析. 作物学报, 2008, 34(9): 1529-1536.
[21]张冬玲, 张洪亮, 魏兴华, 等. 贵州栽培稻的遗传结构及其遗传多样性. 科学通报, 2006, 51(23): 2747-2754.
[22]Zhu Y Y, Chen H R, Fan J H, et al. Genetic diversity and disease control in rice. Nature, 2000, 406: 718-722.
[23]刘炜, 李自超, 史延丽, 等. 利用SSR标记进行粳稻品种的遗传多样性研究. 西南农业学报, 2005, 18(5): 509-513.
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