中国水稻科学 ›› 2018, Vol. 1 ›› Issue (1): 137-145.DOI: 10.16819/j.1001-7216.2018.7091

• 研究报告 • 上一篇    下一篇

ALS抑制剂类除草剂抗性水稻功能标记的开发与验证

陈涛1,2, 张善磊1, 赵凌1, 张亚东1, 朱镇1, 赵庆勇1, 周丽慧1, 姚姝1, 赵春芳1, 梁文化1, 王才林1,*()   

  1. 1江苏省农业科学院粮食作物研究所/江苏省优质水稻工程技术研究中心/国家水稻改良中心南京分中心,南京210014
    2扬州大学江苏省粮食作物现代产业技术协同创新中心,江苏扬州225009
  • 收稿日期:2017-08-01 出版日期:2018-01-10 发布日期:2018-03-10
  • 通讯作者: 王才林
  • 基金资助:
    国家重点研发计划重点专项(2017YFD0100305);现代农业产业技术体系建设专项资金资助项目(CARS-01-62);江苏省重点研发计划资助项目(BE2016416);江苏省农业科学院粮食作物研究所科研基金资助项目(LZS17-7)

Development and Verification of a Functional Marker Associated with Resistance to ALS Inhibitor Herbicide

Tao CHEN1,2, Shanlei ZHANG1, Ling ZHAO1, Yadong ZHANG1, Zhen ZHU1, Qingyong ZHAO1, Lihui ZHOU1, Shu YAO1, Chunfang ZHAO1, Wenhua LIANG1, Cailin WANG1,*()   

  1. 1Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice R&D Center / Nanjing Branch of China National Center for Rice Improvement, Nanjing 210014, China;
    2Jiangsu Co-Innovation Center for Modern Production Technology of Grain Crops, Yangzhou University, Yangzhou 225009, China
  • Received:2017-08-01 Online:2018-01-10 Published:2018-03-10
  • Contact: Cailin WANG

摘要:

【目的】培育具有乙酰乳酸合酶(ALS)抑制剂类除草剂抗性的品种是防治水稻直播田杂草危害最经济、有效的途径之一,而利用分子标记辅助选择有助于提高其品种选择效率。【方法】在明确除草剂抗性突变体黄华占M-1 ALS基因编码区碱基差异的基础上,利用四引物扩增受阻突变体系PCR(Tetra-primer ARMS-PCR)技术,设计引物对不同品种(品系)和淮稻5号/黄华占M-1的F2群体进行基因型检测,并结合除草剂的田间试验对标记的准确性进行验证。【结果】ALS基因编码区序列比对分析表明,尽管籼、粳稻之间具有多处差异碱基,但只有第1642和1643碱基TG到AT的变异能导致位于高度保守域的第548位编码氨基酸由色氨酸突变为甲硫氨酸,进而使水稻产生对ALS抑制剂类除草剂的抗性。依据PCR扩增产物的电泳带型,可以准确区分出3种不同的基因型,其基因型与苗期除草剂抗性的表型完全一致。【结论】利用Tetra-primer ARMS-PCR技术,可以实现对两个连续变异碱基位点基因型的快速检测,从而加快ALS抑制剂类除草剂抗性水稻品种的选育进程。

关键词: 乙酰乳酸合酶基因, 除草剂抗性, 碱基突变, 四引物扩增受阻突变体系PCR

Abstract:

【Objective】Breedingrice varieties with resistance to ALS-inhibiting herbicide is the mosteconomical and effective method to preventweeds in direct-sowing field, and molecular marker-assisted selection canimprove its efficiency. 【Method】The dominant molecular marker, designed for genotypic detection in different varieties and an F2 population derived fromHuaidao5/Huanghuazhan M-1(mutant with resistance to ALS-inhibiting herbicide) was developed with Tetra-primer ARMS-PCR technique, based on the clarified mutation in CDS of ALS gene. 【Result】 The sequence alignment analysis of ALS gene encoding regionshowed that only the mutation from T1642G1643 to A1642T1643 leading to the 548th amino acid substitutionfrom tryptophan to methioninein highly conserved regionwas the critical factors to produce resistance to ALS-inhibiting herbicide inHuanghuazhan M-1, despitethe existence of multiplebase differencesbetween different indica and japonica rice varieties.The results of PCR detection indicated that three different genotypescould be accurately distinguished by electrophoretic bands, and it was exactly consistent with the phenotype of herbicide resistance at the seedling stage. 【Conclusion】 The genotype associated with two continuous base mutations could be rapidly detected by Tetra-primer ARMS-PCRtechnique, and the efficiency for varieties with resistance to ALS-inhibiting herbicidecould be improved in breeding process.

Key words: acetolactate synthase, herbicide resistance, basemutation, tetra-primerARMS-PCR

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