Research Papers

Identification and Gene Mapping of Outcurved Leaf Mutant ocl1 in Rice

Expand
  • 1Longping Branch of College of Biology, Hunan University, Changsha 410125, China
    2Hunan Rice Research Institute, Hunan Academy of Agricultural Science, Changsha 410125, China
    3Key Laboratory of indica Rice Genetics and Breeding in the Middle and Lower Reaches of Yangtze River Valley, Ministry of Agriculture and Rural Affairs, Changsha 410125, China

Received date: 2022-10-20

  Revised date: 2022-11-22

  Online published: 2023-07-17

Abstract

【Objective】 Moderate leaf rolling can enhance photosynthetic efficiency and improve rice yield. Identification of rice leaf rolling mutants will help elucidate the molecular mechanism behind rice leaf formation. 【Methods】 60Co-γ ray irradiation was used to mutagenize indica rice variety Yuzhenxiang and an outcurved leaf mutant was obtained, tentatively named ocl1 (outcurved leaf 1). The phenotypic and agronomic traits of the mutant were investigated. The F2 population of a cross between ocl1 and 02428 was used for mapping of the OCL1 gene. Additionally, the expression of leaf-rolling related genes was analyzed by quantitative PCR. 【Result】 Compared with the wild-type, the leaves of the mutant was characterized by outcurved and drooping leaves from tillering to mature stage. The yield components including the seed setting rate, 1000-grain weight and yield per plant were obviously decreased in ocl1. Cross-section observation of leaves revealed that the bulliform cells between adjacent vascular bundles of ocl1 were larger than those of the wild-type. Genetic analysis implied that these phenotypes of the mutant were controlled by a pair of recessive nuclear gene. The OCL1 gene was fine-mapped to a 127 kb interval between markers RM19575 and ID02612 on the chromosome 6. Sequencing analysis indicated that one of the genes (LOC_Os06g10600) has a single-base mutation at the intron-exon junction, which leads to abnormal splicing and changes in amino acid sequence. The gene encodes a homologous domain-leucine zipper protein, which is an allele to the leaf rolling related gene ROC8 (URL1). Correspondingly, the expression of ROC5 and LAC17 genes related to bulliform cell development was down-regulated in ocl1, while that of XTH11 was up-regulated in ocl.【Conclusion】 The mutation of OCL1 gene results in outcurved leaf by affecting the development of bulliform cells, which in turn leads to a yield reduction.

Cite this article

REN Zhiqi, XUE Kexin, DONG Zheng, LI Xiaoxiang, LI Yongzhao, GUO Yujing, LIU Wenqiang, GUO Liang, SHENG Xinnian, LIU Zhixi, PAN Xiaowu . Identification and Gene Mapping of Outcurved Leaf Mutant ocl1 in Rice[J]. Chinese Journal OF Rice Science, 2023 , 37(4) : 337 -346 . DOI: 10.16819/j.1001-7216.2023.221004

References

[1] 刘永巍, 田红刚, 李春光, 孟昭河, 程芳艳, 孙翊轩, 刘忠良. 水稻超高产育种的研究[J]. 植物学研究, 2014, 3(4): 172-177.
[1] Liu Y W, Tian H G, Li C G, Meng Z H, Cheng F Y, Sun Y X, Liu Z L. The study on super high yield breeding of rice[J]. Botanical Research, 2014, 3(4): 172-177. (in Chinese with English abstract)
[2] Xu Y, Ma K, Zhao Y, Wang X, Zhou K, Yu G, Li C, Li P, Yang Z, Xu C. Genomic selection: A breakthrough technology in rice breeding[J]. The Crop Journal, 2021, 9(3): 669-677.
[3] 郭韬, 余泓, 邱杰, 李家洋, 韩斌, 林鸿宣. 中国水稻遗传学研究进展与分子设计育种[J]. 中国科学: 生命科学, 2019, 49(10): 1185-1212.
[3] Guo T, Yu H, Qiu J, Li J X, Han B, Lin H X. Advances in rice genetics and breeding by molecular design in China[J]. Science China: Life Sciences, 2019, 49(10): 1185-1212. (in Chinese with English abstract)
[4] 梁程, 向珣朝, 张欧玲, 游慧, 许亮, 陈永军. 两份新株型水稻品系的农艺性状与遗传特性分析[J]. 中国水稻科学, 2022, 36(2): 171-180.
[4] Liang C, Xiang X C, Zhang O L, You H, Xu L, Chen Y J. Analyses on agronomic traits and genetic characteristics of two new plant-architecture lines in rice[J]. Chinese Journal of Rice Science, 2022, 36(2): 171-180. (in Chinese with English abstract)
[5] 刘坚, 陶红剑, 施思, 叶卫军, 钱前, 郭龙彪. 水稻穗型的遗传和育种改良[J]. 中国水稻科学, 2012, 26(2): 227-234.
[5] Liu J, Tao H J, Shi S, Ye W J, Qian Q, Guo L B. Genetics and breeding improvement for panicle type in rice[J]. Chinese Journal of Rice Science, 2012, 26(2): 227-234. (in Chinese with English abstract)
[6] Luo Y, Zhao F, Sang X, Ling Y, Yang Z, He G. Genetic analysis and gene mapping of a novel rolled-leaf mutant rl12(t) in rice[J]. Acta Agronomica Sinica, 2009, 35(11): 1967-1972.
[7] Shi Z, Wang J, Wan X, Shen G, Wang X, Zhang J. Over-expression of rice OsAGO7 gene induces upward curling of the leaf blade that enhanced erect-leaf habit[J]. Planta, 2007, 226(1): 99-108.
[8] Fujino K, Matsuda Y, Ozawa K, Nishimura T, Koshiba T, Marco W, Sekiguchi H. Narrow leaf7 controls leaf shape mediated by auxin in rice[J]. Molecular Genetics & Genomics, 2008, 279(5): 499-507.
[9] Zhang G, Xu Q, Zhu X, Qian Q, Xue H. SHALLOT-LIKE1 is a KANADI transcription factor that modulates rice leaf rolling by regulating leaf abaxial cell development[J]. The Plant Cell, 2009, 21(3): 719-735.
[10] Fang L, Zhao F, Cong Y, Sang X, Du Q, Wang D, Li Y, Ling Y, Yang Z, He G. Rolling-leaf14 is a 2OG-Fe (II) oxygenase family protein that modulates rice leaf rolling by affecting secondary cell wall formation in leaves[J]. Plant Biotechnology Journal, 2012, 10(5): 524-532.
[11] Itoh J I, Nonomura K I, Ikeda K, Yamaki S, Inukai Y, Yamagishi H, Kitano H, Nagato Y. Rice plant development: from zygote to spikelet[J]. Plant Cell Physiology, 2005, 46(1): 23-47.
[12] Xiang J, Zhang G, Qian Q, Xue H. SEMI-ROLLED LEAF1 encodes a putative glycosylphosphatidylinositol- anchored protein and modulates rice leaf rolling by regulating the formation of bulliform cells[J]. Plant Physiology, 2012, 159(4): 1488-1500.
[13] Sun J, Cui X, Teng S, Kunnong Z, Wang Y, Chen Z, Sun X, Wu J, Ai P, Quick W P, Lu T, Zhang Z. HD-ZIP IV gene Roc8 regulates the size of bulliform cells and lignin content in rice[J]. Plant Biotechnology Journal, 2020, 18(12): 2559-2572.
[14] Zou L, Sun X, Zhang Z, Liu P, Wu J, Tian C, Qiu J, Lu T. Leaf rolling controlled by the homeodomain leucine zipper class IV gene Roc5 in rice[J]. Plant Physiology, 2011, 156(3): 1589-1602.
[15] Li L, Shi Z, Li L, Shen G, Wang X, An L S, Zhang J. Overexpression of ACL1 (abaxially curled leaf 1) increased bulliform cells and induced abaxial curling of leaf blades in rice[J]. Molecular Plant, 2010, 3(5): 807-817.
[16] Xu Y, Kong W, Wang F, Wang J, Tao Y, Li W, Chen Z, Fan F, Jiang Y, Zhu Q, Yang J. Heterodimer formed by ROC8 and ROC5 modulates leaf rolling in rice[J]. Plant Physiology, 2021, 19(12): 2662-2672.
[17] Fang J, Guo T, Xie Z, Chun Y, Zhao J, Peng L, Zafar S A, Yuan S, Xiao L, Li X. The URL1-ROC5-TPL2 transcriptional repressor complex represses the ACL1 gene to modulate leaf rolling in rice[J]. Plant Physiology, 2021, 185(4): 1722-1744.
[18] Hibara K I, Obara M, Hayashida E, Abe M, Ishimaru T, Satoh H, Itoh J, Nagato Y. The ADAXIALIZED LEAF1 gene functions in leaf and embryonic pattern formation in rice[J]. Developmental Biology, 2009, 334(2): 345-354.
[19] Chen Q, Xie Q, Gao J, Wang W Y, Sun B, Liu B, Zhu H, Peng H, Zhao H, Liu C, Wang J, Zhang J, Zhang G, Zhang Z. Characterization of rolled and erect leaf 1 in regulating leave morphology in rice[J]. Journal of Experimental Botany, 2015, 66(19): 6047-6058.
[20] Xu Y, Wang Y, Long Q, Huang J, Wang Y, Zhou K, Zheng M, Sun J, Chen S H, Jiang L, Wang C M, Wan J. Overexpression of OsZHD1, a zinc finger homeodomain class homeobox transcription factor, induces abaxially curled and drooping leaf in rice[J]. Planta, 2014, 239(4): 803-816.
[21] 谢园华, 李凤菲, 马晓慧, 谭佳, 夏赛赛, 桑贤春, 杨正林, 凌英华. 水稻半外卷叶突变体sol1 的表型分析与基因定位[J]. 作物学报, 2020, 46(2): 204-213.
[21] Xie Y H, Li F F, Ma X H, Tan J, Xia S S, Sang X C, Yang Z L, Ling Y H. Phenotype characterization and gene mapping of the semi-outcurved leaf mutant sol1 in rice (Oryza sativa L.)[J]. Acta Agronomica Sinica, 2020, 46(2): 204-213. (in Chinese with English abstract)
[22] 刘强, 张贵友, 陈受宜. 植物转录因子的结构与调控作用[J]. 科学通报, 2000, 45(14): 1465-1474.
[22] Liu Q, Zhang G Y, Chen S Y. Structure and regulation of plant transcription factors[J]. Chinese Science Bulletin, 2000, 45(14): 1465-1474. (in Chinese with English abstract)
[23] 吴方喜, 罗曦, 蒋家焕, 连玲, 魏毅东, 何炜, 陈丽萍, 蔡秋华, 谢华安, 张建福. 水稻卷叶突变体基因 shallot like1-Fuhui673 鉴定, 克隆与序列分析[J]. 科学通报, 2018, 63(23): 2369-2377.
[23] Wu F X, Luo X, Jiang J H, Lian L, Wei Y D, He W, Chen L P, Cai Q H, Xie H A, Zhang J F. Identification, cloning and sequence analysis shallot like1-Fuhui673 a rolled leaf mutant in rice[J]. Chinese Science Bulletin, 2018, 63(23): 2369-2377. (in Chinese with English abstract)
[24] Eshed Y, Izhaki A, Baum S F, Floyd S K, Bowman J L. Asymmetric leaf development and blade expansion in Arabidopsis are mediated by KANADI and YABBY activities[J]. Development, 2004, 131(12): 2997-3006.
[25] Wang B, Smith S M, Li J. Genetic regulation of shoot architecture[J]. Annual Review of Plant Biology, 2018, 69: 437-468.
[26] 邓秋雨, 肖应辉. 水稻卷叶类型及调控机制研究进展[J]. 作物研究, 2021, 35(4): 376-384.
[26] Deng Q Y, Xiao Y H. Research progress on types and regulation mechanism of rice rolled leaf[J]. Crop Research, 2021, 35(4): 376-384. (in Chinese with English abstract)
[27] 张小惠, 秦亚芝, 张迎信, 占小登, 张振华, 沈希宏, 程式华, 曹立勇, 吴先军. 水稻窄卷叶突变体Nrl3(t)的基因定位[J]. 中国水稻科学, 2015, 29(6): 595-600.
[27] Zhang X H, Qin Y Z, Zhang Y X, Zhan X D, Zhang Z H, Shen X H, Cheng S H, Cao L Y, Wu X J. Gene mapping of a narrow and rolled leaf mutant Nrl3(t) in rice[J]. Chinese Journal of Rice Science, 2015, 29(6): 595-600. (in Chinese with English abstract)
[28] Luan W, Liu Y, Zhang F, Song Y, Wang Z, Peng Y, Sun Z. OsCD1 encodes a putative member of the cellulose synthase-like D sub-family and is essential for rice plant architecture and growth[J]. Plant Biotechnology Journal, 2010, 9(4): 513-524.
[29] 赵芳明, 魏霞, 马玲, 桑贤春, 王楠, 张长伟, 凌英华, 何光华. 水稻生育后期卷叶突变体lrl1的鉴定及基因定位和候选基因预测[J]. 科学通报, 2015, 60(32): 3133-3143.
[29] Zhao F M, Wei X, Ma L, Sang X C, Wang N, Zhang C W, Ling Y H, He G H. Identification, gene mapping and candidate gene prediction of a late-stage rolled leaf mutant lrl1 in rice (Oryza sativa L.)[J]. Chinese Science Bulletin, 2015, 60(32): 3133-3143. (in Chinese with English abstract)
[30] 刘晨, 孔维一, 尤世民, 钟秀娟, 江玲, 赵志刚, 万建民. 一个水稻卷叶基因的遗传分析和精细定位[J]. 中国农业科学, 2015, 48(13): 2487-2496.
[30] Liu C, Kong W Y, You L M, Zhong X J, Jiang L, Zhao Z G, Wan J M. Genetic analysis and fine mapping of a novel rolled leaf gene in rice[J]. Scientia Agricultura Sinica, 2015, 48(13): 2487-2496. (in Chinese with English abstract)
[31] Wang D, Liu H, Li K, Li S, Tao Y. Genetic analysis and gene mapping of a narrow leaf mutant in rice (Oryza sativa L)[J]. Chinese Science Bulletin, 2009, 54: 752-758.
[32] Li C, Zou X, Zhang C, Shao Q, Liu J, Liu B, Li H, Zhao T. OsLBD3-7 overexpression induced adaxially rolled leaves in rice[J]. PLoS One, 2016, 11(6): e0156413.
[33] Li W, Zhang M, Gan P, Qian L, Yang S, Miao, Wang G, Zhang M, Liu W, Li H, Shi C, Chen K. CLD1/SRL1 modulates leaf rolling by affecting cell wall formation, epidermis integrity and water homeostasis in rice[J]. The Plant Journal, 2017, 92(5): 904-923.
[34] Jan A, Yang G, Nakamura H, Ichikawa H, Kitano H, Matsuoka M, Matsumoto H, Komatsu S. Characterization of a xyloglucan endotransglucosylase gene that is up-regulated by gibberellin in rice[J]. Plant Physiology, 2004, 136(3): 3670-3681.
Outlines

/

Tel: 0571-63370278 E-mail: cjrs@263.net
Supported by Beijing Magtech Co., Ltd.