Chinese Journal OF Rice Science >
Minimum of SSR Markers for Analyzing Genetic Variation of Oryza sativa L.
*Corresponding author：E-mail:weixinghua@caas.cn
Received date: 2015-01-19
Revised date: 2015-09-17
Online published: 2015-11-10
A total of 120 SSR markers were used to determine the minimum of SSR markers for analyzing genetic variation of 69 Oryza sativa L. accessions, which have been clearly classified, based on the genetic diversity and population structure. The results showed that: 1) a total of 1,256 alleles were detected with 120 SSR markers. The number of alleles per locus widely ranged from 2 to 27 with an average of 10.5. Nei's genetic diversity index per locus varied from 0.413 to 0.951 with a mean of 0.760; 2) the minimum of SSR markers for analyzing genetic diversity of rice was 72; 3) the number of SSR markers for analyzing population structure of rice was at least 60.
Xiao-ping YUAN, Cai-hong WANG, Hong-zhong DENG, Qun XU, Yue FENG, Han-yong YU, Yi-ping WANG, Xing-hua WEI . Minimum of SSR Markers for Analyzing Genetic Variation of Oryza sativa L.[J]. Chinese Journal OF Rice Science, 2015 , 29(6) : 578 -586 . DOI: 10.3969/j.issn.1001G7216.2015.06.003
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