QTL Analysis for Rice Leaf Morphology at Maturity Stage Using a Recombinant Inbred Line Population Derived from a Cross Between Nipponbare and 9311

WANG Lan, HUANG Lichao, DAI Liping, YANG Yaolong, XU Jie, LENG Yujia, ZHANG Guangheng, HU Jiang, ZHU Li, GAO Zhenyu, DONG Guojun, GUO Longbiao, QIAN Qian, ZENG Dali*

doi:10.3969/j.issn.1001-7216.2014.06.004

2014 , Vol. 28 >Issue 6: 589 - 597

DOI: https://doi.org/10.3969/j.issn.1001-7216.2014.06.004

Research Papers

QTL Analysis for Rice Leaf Morphology at Maturity Stage Using a Recombinant Inbred Line Population Derived from a Cross Between Nipponbare and 9311

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State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China;

Received date: 2014-03-14

Revised date: 2014-04-02

Online published: 2014-11-10

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Abstract

As the main photosynthetic organs, rice leaf morphological characteristic is an important target in high yield breeding. A recombinant inbred line (RIL) population derived from a cross between Nipponbare and 9311 was used to map QTLs for leaf length, leaf width, leaf area and leaf length to width ratio of top three leaves in maturity stage. Correlation analysis showed that there were significant correlation among leaf shape indexes. The leaf shape traits followed a normal distribution with some transgressive individuals,indicating that these complex quantitative traits were controlled by multiple genes. A total of 42 QTLs were detected for these traits, which were mapped on all 12 chromosomes with the phenotypic variations ranging from 4.3% to 29.0%, and the increasing effective alleles contributed by 9311 showed higher additive effect than that from Nipponbare. Seventeen pairs of QTL with epistatic effect were identified among eight traits with explained variations from 3.3% to 23.4%. Pyramiding the positive alleles apparently altered the characters of flag leaf.

Key words： rice; leaf shape; quantitative trait locus; epistatic analysis

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WANG Lan, HUANG Lichao, DAI Liping, YANG Yaolong, XU Jie, LENG Yujia, ZHANG Guangheng, HU Jiang, ZHU Li, GAO Zhenyu, DONG Guojun, GUO Longbiao, QIAN Qian, ZENG Dali* . QTL Analysis for Rice Leaf Morphology at Maturity Stage Using a Recombinant Inbred Line Population Derived from a Cross Between Nipponbare and 9311[J]. Chinese Journal OF Rice Science, 2014 , 28(6) : 589 -597 . DOI: 10.3969/j.issn.1001-7216.2014.06.004

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